General Discussion
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WDL caching in Terra
- Jason Walker
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Error accessing controlled access data that worked fine earlier
- Ash O'Farrell
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VCF File Has Lines of Single Genotype Call in GT Field for A Diploid Organism
- Rose Huang
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Estimating GCE Costs
- Elliot Lefkowitz
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No way to unset input with a default value
- Josh Gould
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Job has been aborting for over a week
- Ash O'Farrell
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parallel processing of jobs for running gwas in hail
- apampana
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New pair set always created, even when selecting an existing pair set
- Justin Rhoades
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Government owned Websites and Datasets (Last Revised Feb 5,2020)
- Salin Thomas
- Edited
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Understand ErrorReport
- Sehyun Oh
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Task can't find localized file.
- Sehyun Oh
- Edited
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How to index a CRAM file on Terra with samtools?
- Ash O'Farrell
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Error during Dropseq_workflow Run on Cumulus
- Hanbing Song
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Interval problem with haplotypecaller-gvcf-gatk4 (suggested workflow
- Matthew Miller
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New error (Validation errors: Extra inputs) running somatic calling pipeline: problem with Cromwell 48?
- lck
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Failed to check notebook status: "Autosave Failed!"
- Stephen Fleming
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Several issues with 2019_ASHG_Reproducible_GWAS workflow and notebook
- Ash O'Farrell
- Edited
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is there a way to use a subset of array as input?
- Yu Qiu
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CGA pipeline scatter getting stuck at localization step for hours
- Liudmila Elagina
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Unending localization step
- Kenneth Westerman
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Handling optional outputs
- matan
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Accessing GTEx data when running workflow
- Tanya Phung
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Updated hg19 TCGA BAM links causing error in multiple workflows
- Sabrina Camp
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Updated hg19 TCGA BAM links not loading in IGV
- Sabrina Camp
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GATK $5 genome pipeline fails because no suitable codecs found in dbSNP VCF index
- Cuca Dogo
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Intermittent StorageExceptions (unknown host www.googleapis.com)
- Bhandsaker
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Data visualization?
- Oliver Ruebenacker
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Can a sample list have an attribute that is a sample list?
- Laura Gauthier
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Can I create Mutet2 PON with hg38 instead of hg19?
- Samuel Terkper Ahuno
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Error checking registration
- Edyta Malolepsza
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