User

Brendan Reardon

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Total activity 181
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Posts

Recent activity by Brendan Reardon

  • exited with return code 247 on TCGA bam from drs:// url

    Hi Terra, I have not been able to figure out this issue. I am attempting to run jobs on TCGA bams with the drs:// URLs but they fail with the following error code. > exited with return code 247 whi...

    • Edited
    • 2 followers
    • 7 comments
    • 0 votes

  • Bug - pop ups inaccessible and off screen in task configuration

    When searching for data model annotations in task configuration, the pop up suggestions will be off screen in some cases. For example, here is a photo of the suggestions being cut off for the botto...

    • 3 followers
    • 3 comments
    • 2 votes
    • Completed

  • Bug report: Copying workflows to a workspace does not include namespace

    When copying a workflow from one workspace to another, namespace is not included. Thus, if you have two workspaces of the same name under a different namespace then you just see two workspaces, sho...

    • 2 followers
    • 1 comment
    • 0 votes

  • Add source workspace name to the job manager

    The underlying workspace name does not appear to be in the job manager for submissions. "Workspace id" is included in the submission labels but this is a unique string that is usually hidden from f...

    • 2 followers
    • 1 comment
    • 1 vote

  • [Bug Report] Copying link URL from the "files" feature yields incorrect URL

    As shown in the attached screenshot, copying the URL from files in the Files feature appends an extra `gs://{root bucket}/` to the overall gs path. 

    • Edited
    • 2 followers
    • 2 comments
    • 0 votes

  • Bug Report: Job manager does not show workflow timing as task is running

    The job manager in Terra only shows a detailed timing diagram (waiting for quota, pulling-image, localizing files, running docker, etc.) upon completion of a task rather than as the task is running...

    • 2 followers
    • 6 comments
    • 0 votes
    • Not planned

  • Bug Report: inconsistent behavior with downloading table tsv for sets

    Hi Terra team, Clicking the `DOWNLOAD TABLE TSV` button in Terra yields two different results depending on if entities are checked or not.  The first, seemingly correct, scenario is clicking the do...

    • 2 followers
    • 8 comments
    • 1 vote
    • Completed

  • PAPI error code 9

    Hi Terra, A method that worked previously on FireCloud/Terra and currently works locally now produced the error code "PAPI error code 9". The error code is non-descriptive and the logs do not produ...

    • 3 followers
    • 11 comments
    • 0 votes
    • Answered

  • "Error Creating Cluster" even when not using Notebooks

    Hi Terra, Within all of my workspaces, I often receive the error "Error Creating Cluster" upon refreshing a page. I'm not sure why this is happening because I am not using notebooks or clusters. Is...

    • 2 followers
    • 2 comments
    • 0 votes
    • Answered

  • Clicking file handle in Job Manager opens search for file in GCloud storage

    This is not quite a feature request but more of feature commentary. Clicking on a file from the Job Manager (screenshot below) opens a search for the file in Google Cloud Storage (screenshot) rathe...

    • Edited
    • 2 followers
    • 2 comments
    • 0 votes