User

Sehyun Oh

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Total activity 158
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Posts

Recent activity by Sehyun Oh

  • Can't access the workflow (from Firecloud) under the public workspace

    Hi! My collaborator is trying to run my public workspace (https://anvil.terra.bio/#workspaces/waldronlab-terra-rstudio/pathml_stain_normalization_template), but he can't access the workflow. I can'...

    • Edited
    • 2 followers
    • 2 comments
    • 0 votes

  • Cost management related to VM/GCS regions

    Hi, I have a few questions related to cloud configuration in Terra. 1. Does the default bucket location changes depending on where the user is? 2. When you clone a workspace, you are bound to the o...

    • 2 followers
    • 5 comments
    • 0 votes

  • Workflow run cost

    Hi! I set up workflow cost reporting following this article: https://support.terra.bio/hc/en-us/articles/360037862771. However, I don't see the total run cost even 24+ hrs after the run. Could some...

    • 2 followers
    • 10 comments
    • 0 votes

  • WDL can't import a public-access file in Google bucket?

    Hi! My workflow fails with the following error: [UserAction] Unexpected exit status 2 while running "/cromwell_root/script": /cromwell_root/script: line 31: syntax error near unexpected token `(' /...

    • 2 followers
    • 7 comments
    • 0 votes

  • Custom RStudio environment

    Hi! I'm trying to use a custom RStudio environment and want to confirm that the behavior I observed is what I should expect (because it's somewhat confusing). I cannot provide a custom RStudio imag...

    • 3 followers
    • 2 comments
    • 0 votes

  • How can I import TARGET data into RStudio?

    Hi! I saw a similar post with my question (https://support.terra.bio/hc/en-us/community/posts/360073223011-How-can-I-get-TCGA-data-into-the-notebooks-for-analysis-? ), but it doesn't fully solve my...

    • 2 followers
    • 1 comment
    • 0 votes

  • Punctuations in the workspace name/namespace

    Hi! I notice that hypen and underscore for billing project name and workspace name are inconsistent between Terra and GCP console. For example, I can create two billing projects (e.g. 'demo-proj' a...

    • 2 followers
    • 1 comment
    • 0 votes

  • Billing project name

    Hi! I create a new billing project in Terra but it didn't appear in my Google Cloud console, which I used to get. Instead, the project name appears in the console once I create a new workspace, as ...

    • 2 followers
    • 1 comment
    • 0 votes

  • How can I overview workspaces?

    Hi! Is there any way to get the overall summary of all the workspaces I have access to? For example, whether they have data (if so, what kinds and how many, etc.), workflows, notebooks, etc. 

    • 2 followers
    • 3 comments
    • 0 votes

  • Create a demo account

    Hi! I want to build a reproducible example of Terra usecases without using my own account. Is there any way to create a demo account? 

    • 2 followers
    • 3 comments
    • 0 votes