Megan Shand

1. Community
2. Known Issues
3. basename() does not function as expected on DRS URIs

For what it's worth, my own workaround for this was the following: task getBasename { input { File drs_vcf } command { ln -s ~{drs_vcf} . ls *vcf.gz > vcf_file.txt } output { ...

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• Edited October 12, 2022 16:19
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1. Community
2. Known Issues
3. basename() does not function as expected on DRS URIs

Jason Cerrato is there any update on when this might be fixed? 

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• October 11, 2022 20:31
• 0 votes

1. Community
2. Active Feature Requests
3. Private WDL Github Sync

I'd also very much appreciate this feature! (I upvoted as well.)

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• December 17, 2021 20:10
• 1 vote

Filtering data model by set

It would be incredibly helpful to be able to view (or download) the rows of a data model that are members of a set. If there's a way to do this right now, I'm not aware of it. If I download the set...

• Megan Shand
• September 30, 2021 20:12
• 5 followers
• 4 comments
• 2 votes

1. Community
2. General Discussion
3. Fixing Cache Miss: 10 failed copy attempts

It did, thank you so much!

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• September 07, 2021 13:12
• 0 votes

Enable Dockstore/Terra to run releases or tags from Github

Dockstore allows me to run WDLs from any branch on Github which is a very helpful feature, but sometimes the WDL will change out from under me if a change is merged on Github. This makes working co...

• Megan Shand
• August 27, 2021 20:20
• 2 followers
• 1 comment
• 0 votes

1. Community
2. General Discussion
3. Fixing Cache Miss: 10 failed copy attempts

That's amazing, thank you Jason Cerrato! I will try that out right now.

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• August 27, 2021 14:31
• 0 votes

Fixing Cache Miss: 10 failed copy attempts

I have workflows that have tasks that don't depend on specific inputs (for example something like GetBwaVersion in the WGS pipeline). I frequently run into the problem that these tasks don't call c...

• Megan Shand
• August 26, 2021 19:40
• 2 followers
• 4 comments
• 1 vote

Call Cache Wizard doesn't work while the task is completing

Hello, The call caching wizard is amazing and I use it all the time. It's helped me understand my WDLs better and debug things that I probably wouldn't have noticed without the Workflow Dashboard. ...

• Megan Shand
• July 01, 2021 14:07
• 2 followers
• 1 comment
• 0 votes