User

tmajarian

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Total activity 42
Last activity
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Activity overview

Latest activity by tmajarian

  • tmajarian created a post,

    Job scheduling at 4 days, total submission time limit of 7 days

    Hi-   I have some very long running jobs (~5 days) that I have been trying to run for a few weeks now. I am seeing some odd behavior in Terra where there is a delay of 3+ days from submission to st...

    • tmajarian
    • 3 followers
    • 2 comments
    • 0 votes
  • tmajarian commented,

    Hi! I know this is an old thread but I am running into the same issue.   Is there really no way to get around this 7 day time limit? Is this a limit imposed by Google or by Terra?   Thanks!

  • tmajarian commented,

    Thanks! I am using the API to delete entities in batches which is working for me. -Tim

  • tmajarian commented,

    There are only 9 rows in the table. The workspace is named "NIH_interop_BDCatalyst". I will share the workspace.   Thanks!  

  • tmajarian commented,

    Hi Samantha- Sure. I'm actually having what seems to be the same issue with both the GUI and API. Using the method you described, I am getting a "failed to fetch" error: Using the API to delete th...

  • tmajarian created a post,

    Deleting entire data tables

    Hi- I have multiple workspaces with 5+ data tables in each. I would like to delete each table in its entirety in each workspace -- to remove all data tables but keep the workspaces themselves. I am...

    • tmajarian
    • 2 followers
    • 7 comments
    • 0 votes
  • tmajarian created a post,

    Cloud environment provisions a 2 CPU main node regardless of configuration

    Hi- I have been trying to start a cluster through Terra running the default Hail docker image. I customized my environment when creating, selecting an 8 CPU machine as the spark master and 5 worker...

    • tmajarian
    • 2 followers
    • 1 comment
    • 0 votes
  • tmajarian created a post,

    VEP with Hail

    Hi- I'd like to run the variant effect predictor through Hail from within a Terra notebook. Instructions for setting up a dataproc cluster that would be able to do this are provided by the hail tea...

    • tmajarian
    • 6 followers
    • 5 comments
    • 19 votes
  • tmajarian created a post,

    Updating Hail

    Hi- I'm writing some notebooks for Terra that utilize Hail but noticed that the version currently used is 0.2.11. This seems to be >1 year old with the current version being 0.2.26. There have been...

    • tmajarian
    • 2 followers
    • 1 comment
    • 1 vote
  • tmajarian created a post,

    Job manager unavailable to specific user

    Hi- A user in my group is having some issues with the job manager page. He has been unable to view the status of jobs in multiple workspaces. I have verified that, using my account, I can view both...

    • tmajarian
    • 3 followers
    • 5 comments
    • 0 votes