James Gatter

1. Community
2. General Discussion
3. Workflow error, key not found

I'm also getting this for a completely unrelated workflow. Docker went out yesterday and their website still seems somewhat unresponsive. That's just my suspicion anyway. Following this.

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• October 16, 2019 14:58
• 2 votes

1. Community
2. General Discussion
3. Ongoing workflow failures with error “key not found”

Working fine for me! Thanks!

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• October 17, 2019 23:24
• 0 votes

1. Terra on Google Cloud
2. Data
3. Managing data with tables

Thanks Allie! I found that even if the Arrays aren't marked as Array types in the data table, Cromwell will still accept them so long as they are surrounded by square brackets and delimited by comm...

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• October 28, 2020 21:31
• 0 votes

1. Terra on Google Cloud
2. Data
3. Managing data with tables

Is there any way to automitically parse a .tsv cell  that contains a delimiter into an Array? For example turn text ["item1,item2,item3"] into an Array[String] = ["item1", "item2", "item3"]? I real...

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• Edited October 28, 2020 20:49
• 0 votes

1. Community
2. General Discussion
3. WDL function read_string() not properly delocalizing paths as files

I accidentally removed dev snapshot 10, sorry! If you want to look at the dev version, make sure you are looking at 9, I believe that is the same as alexandria/dropseq_cumulus/1. I think just looki...

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• Edited April 08, 2020 15:59
• 0 votes