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weikangfei created a post, January 08, 2021 07:20
I used different method to do jointcalling:
gatk HaplotypeCaller --native-pair-hmm-threads 20 -ploidy 1 -I 1.bam -I 2.bam -I 3.bam -O vcf.gz
gatk HaplotypeCaller --native-pair-hmm-t...