Aspen Neuro

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3. IO Error while running MergeBamAlignment on Terra

Hello Tiffany,    I fixed the issue. It turns out the stderr file was truncated for many of the jobs, and the full stderr file can be found in some of the later failed runs.  <...>INFO 2019-07-04 1...

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• July 08, 2019 21:50
• 1 vote

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3. shard-9 consistently failing on Mutect2 PON creation

Hi Sushma,    I've solved my issue when thinking about your suggestion that the last shard was computationally intensive. I looked back at a previous Mutect2 PON workflow I ran last year, and reali...

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• July 24, 2019 17:46
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3. IO Error while running MergeBamAlignment on Terra

Hello Tiffany,   That submission ID works, you can also look at 32928054-6abf-4275-ae63-c1f84fca4f51 as well.  I ran a diff on the newest version of the tool, and the WDL file is identical to the o...

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• July 03, 2019 21:52
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3. SortAndFixTags FileTruncatedException error

Thank you! That fix worked for me. 

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• July 02, 2019 05:13
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3. SortAndFixTags FileTruncatedException error

Woops, forgot to include it.  It is "pd-wgs-workspace", in the project "pd-wgs-project". 

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• June 28, 2019 18:53
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