Marc Perry

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2. Active Feature Requests
3. When sharing a workspace prompt to share workflows too

This sounds extremely helpful/useful, any update?

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• November 03, 2021 20:31
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2. General Discussion
3. Disparity between RAM usage on GCP VM compared to Terra Workflow

Hi Jason, Yes, I ran it both as a WDL workflow using Cromwell, and simply in the Docker container, and they both used over 600 GB of RAM.  However I think this has now drawn my attention to the fac...

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• October 20, 2021 20:27
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3. Disparity between RAM usage on GCP VM compared to Terra Workflow

Hi Jason, Sure, since I thought I was having a problem with limited RAM memory, I configured a GCP VM that was optimized for memory: m1-megamem-96 (96 vCPUs, 1,433.6 GB memory) (!) But when I run...

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• October 18, 2021 20:02
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3. Disparity between RAM usage on GCP VM compared to Terra Workflow

Hi Jason, That job died with this error: "stderr for job `usherPlaceNewSamples.Extract:NA:1` contained one of the `memory-retry-error-keys: [OutOfMemory,Killed]` specified in the Cromwell config. J...

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• October 18, 2021 17:58
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3. Disparity between RAM usage on GCP VM compared to Terra Workflow

Hi Jason, Sure thing.  I will change those settings and re-run.  I do run it with call caching enabled, but we are pulling data from California Department of Public Health SARS-CoV-2 sequence datab...

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• October 15, 2021 20:38
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3. Disparity between RAM usage on GCP VM compared to Terra Workflow

Hi Jason, I tried to provide this information on OCT-12 by replying to your Email but perhaps that method does not work the way I imagined. This workspace already has that user added as a Reader: u...

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• Edited October 14, 2021 18:02
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