Synopsis and Description in Terra Workflow

Post author
D. R. Mani

Is there an automated way to populate the synopsis and description fields of a Terra workflow (using comments or other sections in the WDL)? I seem to remember that something like this was possible in FireCloud.

Comments

4 comments

  • Comment author
    Jason Cerrato

    Hi D. R. Mani,

    Are you trying to create/upload a WDL to some place in particular? The Methods Repository still exists in FireCloud. I believe this is what you were referring to? https://portal.firecloud.org/#methods

    Kind regards,

    Jason

    0
  • Comment author
    D. R. Mani

    We have automated scripts that upload WDLs to the FireCloud Methods Repository (using fiss commands). I would like to automatically add Synopsis and Description to these uploaded methods. Is this possible? Thanks!

    Mani

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  • Comment author
    Jason Cerrato

    Hi Mani,

    You may be able to edit your scripts to leverage the Low-Level API described in the FISS documentation to populate synopsis and documentation fields.

    This would be the API of interest: https://api.firecloud.org/#/Method%20Repository/post_api_methods

    Kind regards,

    Jason

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  • Comment author
    D. R. Mani

    That sounds like a good idea. I'll give it a try. Thanks!

    Mani

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