There is an exciting new feature for proteomics research that will allow researchers to import data from the Proteomic Data Commons (PDC) into Terra for analysis with the platform’s integrated tools.
Users can identify data of interest by applying metadata filters on the PDC portal, and then clicking a PFB button the data will be transferred to Terra for analysis. Please review the documentation on the PDC portal here: https://pdc.cancer.gov/pdc/cloud-data-analysis
As part of the introduction of this feature, there are some template resources to help researchers analyze the data they’ve selected. These include a workspace intended to facilitate automated data download and streamlined analysis of raw proteomic data imported from the PDC using the FragPipe proteomics pipeline. You can learn more about these resources by visiting the links below: