Getting Started WDL Tutorials
Step-by-step tutorials for writing pipelines in WDL.
- WDL puzzles: Hands-on practice for scripting and configuring Terra workflows
- (howto) Install software for WDL workshops
- [1] (howto) Write your first WDL script running GATK HaplotypeCaller
- [2] (howto) Write a simple multi-step workflow
- [3] (howto) Run a sample variant discovery mini-pipeline
- [4] (howto) Use scatter-gather to joint call genotypes