Arun Seetharam
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Recent activity by Arun Seetharam
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processing-for-variant-discovery-gatk4 workflow: fails repeatedly at SamToFastqAndBwaMem step
Hello, I'm not sure if I'm doing something wrong, but I've been trying to test the GATK Best Practices Germline SNPs and INDELS with non-downsampled files, and it seems to have a problem at the BWA...
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Running `GATK Best Practices Germline SNPs and INDELS` on custom genome
Hello, This question is related to `GATK Best Practices Germline SNPs and INDELS` workspace and my question is about implementing this on a custom genome (non-model) species. Our real dataset (~4...
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