Dan Spagnolo
Activity overview
Latest activity by Dan Spagnolo
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Dan Spagnolo commented,
Yes, Sushma's suggestions helped me greatly. Thanks Sushma Chaluvadi! I did have to use stringr as you mentioned, not readr. Is this the standard way to access data in an R notebook Jason Cerrato?M...
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Dan Spagnolo commented,
Thanks! This looks like it is working, though I had to hard code in the bucket directory since I don't have str_glue() installed and wasn't sure what library it is a part of. So is this copying the...
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Dan Spagnolo commented,
Doesn't seem to be doing what I need. It's not clear to me how to load in data sitting in a Google Bucket in a Terra R notebook. E.g. loading up gs://my-directory/file with something as simple as r...
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Dan Spagnolo created a post,
Using Data from Google Bucket in R Jupyter Notebook or changing work directory
Note: I am not looking to copy files to the notebook disk per https://support.terra.bio/hc/en-us/articles/360046617372-Analyzing-data-from-a-workspace-bucket-in-a-notebookI would like to load in a ...
- Dan Spagnolo
- 5 followers
- 13 comments
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Dan Spagnolo commented,
Hi Jason Cerrato . This is still a bit over my head. Not sure how to follow your instructions.What do you mean by authenticate your account? I am clicking the "authorize" button but I'm not sure wh...
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Dan Spagnolo commented,
Hi Beri can you elaborate on creating a custom docker container with a custom Spark configuration? I am having the same error as Elizabeth, caused by a different function but the result is I need m...
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Dan Spagnolo created a post,
Tuning Apache Spark in Runtimes
I am attempting to run PCA on a large dataset using Hail. I am using the Terra Hail environment. I have an "Increased Computing Power" master node, and 24-odd worker nodes with 15GB memory. The err...
- Dan Spagnolo
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- 3 comments
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