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Daniel Boiarsky

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Recent activity by Daniel Boiarsky

  • Workflow submissions not finishing

    Hi,   I have this workflow https://portal.firecloud.org/?return=firecloud#methods/neoantigen_prediction/run_prediction/27 in vanallen-firecloud-dfci/CR_NV_WES_IO_Meta and it seem like some of my su...

    • 2 followers
    • 2 comments
    • 0 votes

  • signal 11 (SEGV) (core dumped) issue

    Hi, I'm getting the following error message when running a workflow: (ERR): bowtie2-align died with signal 11 (SEGV) (core dumped) It seems like this error happens specifically on ubuntu (https://s...

    • Edited
    • 2 followers
    • 5 comments
    • 0 votes

  • Papi Error Code 13

    Hi, Looking for some direction as to how to address the error below. Thanks for the help! The job was stopped before the command finished. PAPI error code 13. Execution failed: generic::internal: a...

    • 5 followers
    • 39 comments
    • 0 votes