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Jason Cerrato

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Articles

Recent activity by Jason Cerrato

  • How to get notified about workspace data updates and workflow submissions

    Learn how to toggle workspace notifications on and off, so that you get an email when someone updates the data in the workspace or submits a workflow - or turn these notifications off! Overview: wo...

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  • Error message: PAPI error code 10

    The Error PAPI error code 10. The assigned worker has failed to complete the operation. What it means  In general, if you ever see your workflow fail with PAPI error code 10. The assigned worker ha...

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    • 3 followers
    • 6 comments
    • 2 votes
  • How to troubleshoot and fix stalled workflows

    Is your workflow taking a long time to move from submitted to queued and from queued to running? Read on for why your workflow may be "stuck" and best practices for resolving the issue.  To learn m...

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    • 1 vote
  • Broad Public Reference Data

    The Broad Institute provides a number of reference data files, hosted by Google and available for anyone to use. Reference data include standard Human reference files (hg19, hg38) as well as mouse,...

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  • How to report an issue

    If something appears broken, slow, or just plain weird, we want to hear about it! Reporting issues allows us to identify necessary improvements and work toward building a more positive Terra experi...

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    • 1 follower
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    • 1 vote
  • Issue: Slow localization of input files

    In this article, you'll learn a possible solution for files that localize slowly. The Issue File inputs are localizing slower than expected for your workflow task(s). Possible Solution File input/o...

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    • 2 followers
    • 1 comment
    • 1 vote
  • Error: Notebook cloud environment not starting due to insufficient disk space

    Learn what to do if your notebook cloud environment won't start because of insufficient disk space. The Error You run out of disk space in your interactive cloud environment, which prevents you fro...

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  • Default runtime attributes for workflow submissions

    Runtime attributes can be configured within a WDL's task block, but if no value is specified for any one of the customizable attributes, your task will run with the default runtime attribute value....

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  • Error message: PAPI error code 9

    The Error Task <task_id> failed. The job was stopped before the command finished. PAPI error code 9. Please check the log file for more details: <link_to_gs_log_file.log>. What it means  PAPI err...

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  • How to adjust Cloud Environments autopause

    Occasionally, you may need to extend the default autopause time (30 minutes) to accommodate long-running (i.e., more than 24 hours) jobs. Note: Autopause is already disabled for up to 24 hours as l...

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