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Derek Caetano-Anolles

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Articles

Recent activity by Derek Caetano-Anolles

  • How to customize and launch JupyterLab

    Jupyter Notebooks run on virtual machines (VMs) or clusters of machines in your Jupyter Cloud Environment. You can adjust the configuration of your Jupyter app to fit your computational needs.  Th...

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  • How to collaborate in a shared workspace

    "Sharing" a workspace allows collaborators to actively work together in the same workspace. Sharing a workspace lets you see what sorts of changes your colleagues implement, troubleshoot efficientl...

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  • How to clone/delete workspaces

    Learn how cloning a workspace makes an independent copy of the workspace under your own Terra Billing project. Since you are the owner and sole user (until you choose to "share" your copy with some...

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  • How to save data from an interactive analysis to workspace storage

    For longer-term storage of files generated from an interactive Cloud Environment (i.e. JupyterLab), you can copy them from your Cloud Environment's persistent disk to the workspace blob storage. Th...

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  • How to create a table from scratch

    Once you have brought your own data into your Terra on Azure workspace blob storage or have URLs to Azure-hosted open-access data, you can organize it in a data table by generating and uploading a ...

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  • Uncovering structural variation with the GATK-SV pipeline [February 13, 2023]

    On February 13, 2023, the Broad Institute's Data Sciences Platform presented a 4-hour workshop on Uncovering structural variation with the GATK-SV pipeline, in which we walked through the GATK-SV p...

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  • JupyterLab Quick Tips

    JupyterLab is very powerful once you are familiar with the basics, but it also offers lots of additional benefit once you see what else is possible. Here are some shortcuts and helpful hints when u...

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