Sabrina Camp
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Recent activity by Sabrina Camp
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Hi Samantha, This issue did resolve itself last week. However, I am coming across this issue again this week where the environment creation times out. This happens using any custom environment. Is...
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Hi Samantha, I'm using an older base image intentionally. If I always use the most recent image, the packages installed would be newer/different versions which hurts the reproducibility in my resea...
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scamp@broadinstitute.org terra-10407992 saturn-30f54dde-6911-4c80-8c62-c94008e53c75 Issue started around 10 AM
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Update: The next time I started the cloud environment (today, after increasing the disk 3 days ago), the additional disk was present on /home/jupyter/notebooks. I'm not sure why there was a delay, ...
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Hi, One of the workspaces is "vanallen-firecloud-nih/VanAllen_Master_Prostate_copy_germline_analysis". An example submission ID is 5226e3cf-fc15-4228-9f80-40c929db4512 with a few of the failed work...
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Also on another note, I am trying to use bam files from the hg38 cohort and see this note on the dashboard of the workspace "hg38 TCGA and TARGET workspaces reference files by their GDC UUIDs. In o...
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I am running into the same issue as well. I would love to see this feature!
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- 2 votes
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Hi Samantha, I am trying to upload columns to the sample set table. I thought that the way to do this was to have the sample_set_ids in the entity:sample_set_id column and then add other columns I ...
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Hi! The workspace name is all_germline_control_cohorts. There is no submission/ workflow ID because I am just uploading a sample set table. This is a screenshot of what it looks like. Best, Sab...
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Hi Tiffany, Thank you for the update! All of the workflows are now working as usual. All the best, Sabrina
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