lck
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Recent activity by lck
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Not sure if this is the right place to bring this up, but I'm seeing a "Working with Docker" pop-up every single time I click anything in the notebooks section of a workspace. Is there a way to mak...
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- 1 vote
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Software: R Package: tableone Function: Easy creation of "table one"-type tables for analyses (Alternatively, I'd love a way to install this myself in a notebook. It fails, I think because I can't ...
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Thank you! I must have messed up while editing and uploaded the wrong one. The job completes without exiting after the error now -- thank you so much for all of your help and patience! Now I'll jus...
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The good news is: that change allowed the wdl to load successfully and run. The bad news is: So, the same error as before. If it helps, this was submission ID 7f2ec587-c77f-4acf-9d4b-eeb1fd7f7ea9,...
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Not sure if I'm doing something wrong, but I get an error when I try to save a snapshot with that edit:
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Sure -- the submission ID is e93c6e1a-6343-4679-b9eb-01b0343e7ff8 and the workflow ID is 002caa1c-d7e2-4ce9-ba84-e3332c565787.
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As far as I can tell, the Funcotator task is being fed the standard runtime -- it appears that way from the wdl (which is the standard somatic variant calling pipeline from the GATK featured worksp...
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Thank you, Jason! I was able to change the code as you described above, and the job no longer hangs -- but unfortunately, it still fails the way it did before I added the "continueOnReturnCode: [0,...
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I'm struggling a bit with understanding and controlling our costs -- starting in April, a big chunk of our costs (~20%) began to go to "logs ingestion." I would love some advice about how I can con...
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Oh, that's encouraging! Thanks for the update.
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