User

Yossi Farjoun

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Recent activity by Yossi Farjoun

  • Asked for preemtible, but getting non-preemtible

      As part of my 5000 submissions of BAM->gVCF workflow I run HaplotypeCaller with preemptible=3. looking at the operations (via firecloud) I see that I'm actually getting non-preemptible machines, ...

    • 2 followers
    • 1 comment
    • 0 votes

  • Resource unavailable (DISKS_TOTAL_GBS and CPUS) when running 5000 samples

    I've been trying to process 5000  samples (Cram->Bam for now) and it's been taking very long (I submitted on Friday (3 days ago) and I still have >1000 "running"). when the long running jobs comple...

    • 6 followers
    • 18 comments
    • 0 votes