Alexander Bick
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I completely agree! Standard GATK workflows on Terra generate a lot of intermediate files that are often equal in size if not larger to the input and output files -- and that storage cost adds up ...
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I have the same challenge as Tiffany ... using a default WDL (for example https://dockstore.org/workflows/github.com%2Fgatk-workflows%2Fgatk4-somatic-snvs-indels%2Fmutect2_nio) there are ~100 field...
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