Benjamin Doran
Comments
Votes on activity by Benjamin Doran
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Completely agree with this. Current setup is really unforgiving to mistakes in choosing authorization domains. And it is very unclear to users what authorization domains actually are, when they are...
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- 1 vote
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Not sure if this is the reason Elena wants multiple run times. But for me a big use case, and part of our reason for moving into the cloud is that our analyses can take a long time to run. It is re...
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- 1 vote
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Thanks!
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- 0 votes
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That sounds great! Our lab has been looking for a way, as papers are published and projects finish, to freeze workspaces. We need to keep all the scripts and data, so we don't want them deleted. It...
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- 0 votes
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What is the "lock" feature. ( I came directly to terra, not through firecloud ). One feature our group would love is to set a workspace to read only and auto-coldstore all files in the workspace bu...
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- 0 votes
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Tested and confirmed! hdf5r is able to be installed in resulting cluster. It would still be useful to not need the startup script, but this should work for now.
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- 0 votes
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Seems like h5py might work because it is already precompiled. Main issue is that I am trying to get this data into Seurat which needs the hdf5r package to work... I have tried using a startup scri...
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- 0 votes
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This seems to work for installing hdf5 from a notebook %%bashmkdir -p ~/.hdf5cd ~/.hdf5gsutil cp gs://fc-fc0d5126-8840-4d53-801e-71f6c3ca07d6/hdf5-1.10.5.tar.gz .tar -xzvf hdf5-1.10.5.tar.gzcd hdf5...
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- 0 votes
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This was a sample-set of which this is one sample that has a scatter workflow of 17 shards
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- 0 votes
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This is what I see. In this particular case hovering over the green triangle in the top card only shows "workflow failed"
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- 0 votes