Allie Hajian
Articles
Recent activity by Allie Hajian
-
Overview: Research in the cloud on Terra
Terra's mission is “to help accelerate research by integrating data, analysis tools, and built-in security components to deliver frictionless research flows from data to results.” What does that me...
- Updated
- 3 followers
- 0 comments
- 9 votes
-
Terra costs and billing (GCP) details
This article outlines what operations in Terra have a Google Cloud cost and how you will pay for GCP resources with a Terra Billing project linked to a Google Cloud billing account. It also explain...
- Updated
- 2 followers
- 0 comments
- 1 vote
-
Creating safe and secure custom Docker images
Learn how to avoid risks and follow best practices in creating safe and secure Docker images. If you're bringing your own Docker image, please consider the following security advisoryIf you base yo...
- Updated
- 2 followers
- 0 comments
- -1 votes
-
How to change the Google Cloud Billing account of a Terra Billing project
Learn how to change the Google Cloud Billing account that funds a Terra Billing project. You may want/need to do this, for example, if there is a change to the funding source, and you are the Terr...
- Updated
- 1 follower
- 0 comments
- 0 votes
-
Broad Genomics: Downloading data from a Terra workspace
This article describes ways Broad users can retrieve data stored in a Workspace bucket in Terra. If you have not yet registered for a Terra account, find step-by-step instructions in How to regist...
- Updated
- 2 followers
- 0 comments
- -3 votes
-
How to move data to/from a Google bucket
Explore how to add data to - or download from - your Workspace bucket or an external Google bucket. The best approach depends on how many files you have and what size they are, whether you're movin...
- Updated
- 4 followers
- 2 comments
- 2 votes
-
Data Model: How to process readgroup-level files
Learn how to run workflows on data with readgroups. This procedure is no longer necessary. The instructions in this article were necessary to run a workflow on readgroup-level data in an earlier ...
- Updated
- 1 follower
- 0 comments
- -1 votes
-
Creating a list file of reads for input to a workflow
Raw genomics data is in the form of many reads from the sequencer. Since it would be messy and time-consuming to type in the location of every one of these data files as input for a WDL, the input ...
- Updated
- 5 followers
- 9 comments
- 0 votes
-
Why and how to use GPUs when running a workflow
Graphical Processing Units (GPUs) are a kind of computer processor. They can accelerate certain tasks that are specifically coded to use them, providing faster turnaround and cost savings compared ...
- Updated
- 1 follower
- 0 comments
- 1 vote
-
Configuring workflow inputs - sets and pairs tables
Learn how to set up (configure) more complex workflow inputs in Terra, including inputs from nested tables (i.e., arrays and pairs). Note: This article is for analyses using inputs from a workspace...
- Updated
- 1 follower
- 0 comments
- 0 votes