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Allie Hajian

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Articles

Recent activity by Allie Hajian

  • Set up billing with $300 Google credits to explore Terra

    If you've never logged into the Google Cloud console to set up billing, you are eligible for $300 in free Google Cloud credits you can use for working in Terra. Read on for step-by-step instruction...

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  • Error message: File is larger than 10000000 Bytes

    What this looks like You’ve likely used one of the read_X functions in your WDL and have surpassed the default limits set in Terra’s Cromwell instance. In practice when Cromwell starts reading a fi...

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  • Deeper dive: WDLs, workflows, tasks

    Learn how to dissect the parts of your WDL - inputs and outputs and tasks. Helpful when troubleshooting.  Identifying workflow and task inputs and outputs Inputs and outputs are defined in the WDL ...

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  • How to retrieve the time and cost of a completed workflow

    Below is an example of how the time and cost is obtained after a submitted workflow on Terra has completed. Note that workflow data on BigQuery is not available until some hours after the workflow ...

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  • Using the Command Line Interface (CLI) to upload a workflow 

    The FireCloud Command Line Interface (CLI) provides another option to upload workflows (WDL) to the Method Repository. Download the FireCloud Command Line Interface. You can also run a Docker ver...

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  • Job History overview (monitoring workflows)

    The Job History tab is your workspace operations dashboard, where you can check the status of past and current workflow submissions, drill down to see what’s going on (i.e., troubleshoot), and find...

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  • Interactive analysis apps: Galaxy, Jupyter notebooks and RStudio

    Integrated Jupyter Notebooks, RStudio and Galaxy apps let you analyze data in real time in a Terra workspace. These apps run on virtual machines in a dedicated workspace Cloud Environment. This art...

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  • Overview: How much does my interactive analysis cost?

    Executing jobs on the cloud can be scary if you don't know how much you're spending. Read on for an overview of how to estimate the cost of an interactive analysis in Terra. Cloud Environment (i.e....

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  • Controlling Cloud costs - sample use cases

    Considering key Cloud costs described in Understanding and controlling Cloud costs, we examine some use cases and provide the framework for their costs. Specific costs will vary based on software v...

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  • Overview: Controlling Cloud costs on Terra

    This document provides information on the costs of using key cloud services (Google Cloud Storage, Google Computer Engine, and Google BigQuery). Review some examples that can help you make informed...

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