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smk_84

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Latest activity by smk_84

  • smk_84 created a post,

    Gather script fails in scatter gather.

    Hi, I am trying to use WDL on my local cluster. I was trying to use WDL scatter gather parallelism. But everytime I run it I get a weird error that I have not gotten before. What makes it wierd is ...

    • smk_84
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  • smk_84 commented,
    1. Documentation
    2. ...
    3. RStudio
    4. Wrapping R scripts in WDL

    So is the r script needed to be run inside the wdl using  ``` command <<< R ~{scriptname_rscript} --no-save --args ~{argname1} ~{argname2} >>>``` Why can't we run it using Rscript instead? ``` comm...