User

Megan Shand

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Total activity 111
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Votes 32
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Posts

Recent activity by Megan Shand

  • Preview of table when uploading data to Terra

    In Firecloud when you upload a tsv file to populate the data model it shows you a preview of the file before you click Upload. This functionality is missing in Terra.   It's cutoff in the screensh...

    • 2 followers
    • 1 comment
    • 0 votes

  • Documentation for uploading data in Terra should be linked when you try to upload

    There should be documentation on what format Terra expects data to be uploaded for the data model linked (or shown) right there when you try to upload data (in fact, this used to be a feature in Fi...

    • 2 followers
    • 1 comment
    • 0 votes
    • Completed

  • Seeing Inputs and Outputs to a task in Job Manager

    It would be great to be able to see a list of inputs and outputs for an individual task in Job Manger. You can see an Inputs tab and an Outputs tab for each subworkflow, but I can't find a way to s...

    • 6 followers
    • 7 comments
    • 2 votes
    • Completed

  • Columns in Job Manager

    In the monitoring tab of Firecloud there are a few columns that are (semi) human readable such as Data Entity: But in Job Manager I lose that column: It would also be nice if the Workspace ID cou...

    • 3 followers
    • 2 comments
    • 1 vote
    • Completed

  • Jobs not showing up in Job Manager

    I recently submitted a large number of workflows in terra and when I clicked to see more it took me to an empty Job Manager page. Perhaps it just takes time to populate? I was surprised because 45 ...

    • 4 followers
    • 8 comments
    • 0 votes
    • Completed

  • Updating Tool Snapshot

    I have to update tool snapshots very often. This is something I still have to bounce back to Firecloud to do because I can't find a way to do it in Terra. Usually when I need to go back to Fireclou...

    • 4 followers
    • 4 comments
    • 5 votes

  • Resubmitting Failed Workflows Makes a new Set

    The new feature to be able to resubmit failed workflows is amazing! It has already saved me a ton of time and made my Terra experience better. However, I found it surprising that it generated a new...

    • 4 followers
    • 5 comments
    • 3 votes

  • Running Icon in Terra Notebooks

    When a notebook outside of Terra is actively running I get a helpful icon on the tab of the browser to indicate that it is still running (or that it has finished) so I can look at other tabs/window...

    • Edited
    • 1 follower
    • 0 comments
    • 0 votes

  • Accessing data in Terra Notebooks

    I currently use `firecloud.api` to interact with the data in my workspace from the notebooks. This means that there’s actually nothing associating my notebooks to a given workspace (within my pytho...

    • 3 followers
    • 2 comments
    • 1 vote

  • AutoPause in Terra Notebooks

    It would be great if I could configure (or at least see) the length of time before auto-pause kicks in. Right now, I feel like if I step away for an hour (or less) the cluster is shut down. Since i...

    • 4 followers
    • 3 comments
    • 1 vote
    • Completed