User

Megan Shand

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Total activity 111
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Votes 32
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Posts

Recent activity by Megan Shand

  • Filtering data model by set

    It would be incredibly helpful to be able to view (or download) the rows of a data model that are members of a set. If there's a way to do this right now, I'm not aware of it. If I download the set...

    • 5 followers
    • 4 comments
    • 3 votes

  • Enable Dockstore/Terra to run releases or tags from Github

    Dockstore allows me to run WDLs from any branch on Github which is a very helpful feature, but sometimes the WDL will change out from under me if a change is merged on Github. This makes working co...

    • 2 followers
    • 1 comment
    • 0 votes
    • Completed

  • Fixing Cache Miss: 10 failed copy attempts

    I have workflows that have tasks that don't depend on specific inputs (for example something like GetBwaVersion in the WGS pipeline). I frequently run into the problem that these tasks don't call c...

    • 2 followers
    • 4 comments
    • 1 vote

  • Call Cache Wizard doesn't work while the task is completing

    Hello, The call caching wizard is amazing and I use it all the time. It's helped me understand my WDLs better and debug things that I probably wouldn't have noticed without the Workflow Dashboard. ...

    • 2 followers
    • 1 comment
    • 0 votes

  • Call Cache Diff bug

    The new Call Cache Diff Debugging Wizard on the Workflow Dashboard page is amazing! I've already found one call caching issue that will speed up my development time. However, frequently when I try ...

    • 2 followers
    • 1 comment
    • 0 votes

  • Workflow fails with no error message if an input is missing

    I ran a WDL with an input defined as workspace.some_file. However I didn't actually have some_file defined in the workspace attributes. When I went to run the WDL it failed immediately but with no ...

    • 2 followers
    • 1 comment
    • 0 votes

  • Feature Request: See how many jobs are running at a time

    Sometimes I submit more than ~2400 jobs at a single time in one workflow or many workflows (meaning some jobs will get delayed). Since these jobs can be in many workflows or subworkflows it's diffi...

    • 1 follower
    • 0 comments
    • 0 votes

  • Way of knowing output is the latest version/run in data model

    Sometimes we rerun workflows multiple times as the version of a pipeline matures. In this case some of the columns in the data model will be filled in from previous runs, but when we run the latest...

    • 1 follower
    • 0 comments
    • 1 vote

  • Workflows should default to correct entity type

    When I export a method from the Broad Methods Repository I get a window that looks like this: where I can select a root entity type. But when it exports to Terra it loses that root entity type and...

    • 2 followers
    • 2 comments
    • 1 vote
    • Completed

  • Citation of a featured workspace

    Hello, What is the correct way to cite a featured workspace in Terra? Thanks!

    • 2 followers
    • 5 comments
    • 0 votes