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Kate Herman

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Activity overview

Latest activity by Kate Herman

  • Kate Herman created an article,

    ASHG 2019 [October 17, 2019]

    Reproducible Analysis on the Cloud: Creating and Sharing Methods and Analyses with Terra The lack of portability and reproducibility of analysis methods limits the effectiveness with which biomedic...

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  • Kate Herman created an article,

    Terra workshop for EnCODE [ May 21, 2020]

    Broad instructors gave a Terra workshop in collaboration with EnCODE on May 21, 2020. All materials can be found here.   This tutorial uses the Terra platform to compare two H3K27ac ChIP-Seq profil...

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  • Kate Herman created an article,

    BOSC Dockstore and Terra Workshop: COVID 19 [July 18, 2020]

    In this tutorial you will be working through the COVID-19 workspace. The workspace has several workflows that can be used to process COVID raw uBAM sequences but for this tutorial we’ll focus on ru...

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  • Kate Herman created an article,

    ISMB 2020: Analyzing data in the cloud with Gen3, Dockstore, and Terra [July 9, 2020]

    Goals: Guide you through the capabilities and components of the NHGRI Genomic Data Science Analysis, Visualization and Informatics Lab-space (AnVIL) resource.  Gain working knowledge of how the com...

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  • Kate Herman created an article,

    ASHG 2020 [Oct 30, 2020]

      On Oct 30, 2020, instructors from the Broad Institute released materials for a virtual Terra course as a part of the American Society of Human Genetics   The bioinformatics of tomorrow… today  Pr...

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  • Kate Herman created an article,

    Terra 101 for eMERGE [Nov 10, 2020]

      On November 10, 2020, instructors from the Broad Institute taught a 4-hour virtual webinar for the eMERGE group.     Materials You can find all the materials here. To follow along with this work...

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  • Kate Herman created an article,

    Terra 201: Working with Gen3 data [Nov 12, 2020]

    This workshop is out of date. Check out the updated two part onboarding starting here. On November 12, 2020, instructors from the Broad Institute taught a 2-hour virtual webinar as a part of a 2-da...

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  • Kate Herman created an article,

    AnVIL VADSTI Workshop [April 22-23, 2021]

    On April 22-23, 2021, instructors from the Broad Institute and Johns Hopkins University taught a 2-day virtual webinar to the as a part of the 8-week Virtual Applied Data Science Training Institute...

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  • Kate Herman created an article,

    NHLBI BioData Catalyst Onboarding Webinar 2 [April 1, 2021]

    On April 1, 2021, instructors from the Broad Institute taught a 3-hour virtual webinar to the NHLBI BioData Catalyst (BDC) group. In this webinar, you will learn about: WDL structure and writing y...

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  • Kate Herman created an article,

    NHLBI BioData Catalyst Onboarding Webinar 1 [March 16, 2021]

    On March 16, 2021, instructors from the Broad Institute taught a 4-hour virtual webinar to the NHLBI BioData Catalyst (BDC) group. In this webinar, you will learn how to: Export, organize, and ana...

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