Mat Nightingale

Member since October 18, 2021 13:46

Total activity 7

Last activity October 28, 2021 15:47

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Activity overview

Latest activity by Mat Nightingale

Mat Nightingale commented, October 28, 2021 15:47
Hi Emil, I was able to use your instructions to complete the analysis successfully, but I've not had much time to look at it since. I hope to spend some time on it over the next week or so. Thanks ...
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- October 28, 2021 15:47
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Mat Nightingale commented, October 22, 2021 12:22
Hi Emil, Thanks for the reply. Changing the attributes from read_group_set to just read_group made no difference. I still get the error Workflow input processing failed (Caused by [reason 1 of 1...
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- October 22, 2021 12:22
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Mat Nightingale commented, October 19, 2021 10:32
Hi Emil, It's https://app.terra.bio/#workspaces/Genomics/Exome-Analysis-Pipeline%20copy
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- October 19, 2021 10:32
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Mat Nightingale commented, October 18, 2021 20:34
Hi Emil, Did the share not go through, its showing as shared to GROUP_FireCloud-Support@firecloud.org at my end. Mat
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- October 18, 2021 20:34
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Mat Nightingale commented, October 18, 2021 18:16
Thanks Emil. I've shared it, i'm trying to run 1-ExomeGermlineSingleSample, my sample is F10-081 and can be seen in the read_group area. I'm sure it's something simple but I'm really looking to dip...
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- October 18, 2021 18:16
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Mat Nightingale created a post, October 18, 2021 13:46
ExomeGermlineSingleSample fails

I'm new to Terra.bio, but I've converted my fastq.gz files to uBAM using the Sequence-Format-Conversion workflow, and now want to put that uBAM into the ExomeGermlineSingleSample workflow. I've imp...
- Mat Nightingale
- October 18, 2021 13:46
- 3 followers
- 13 comments
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ExomeGermlineSingleSample fails