StarGenerateReferences Papi error code 10

Post author
McCracken, Carrie

I am getting an error in the GATK4-RNA-Germline-VariantCalling workflow. The StarGenerateReferences task is getting an error.

Task RNAseq.StarGenerateReferences:NA:1 failed. The job was stopped before the command finished. PAPI error code 9. Execution failed: allocating: selecting resources: selecting region and zone: no available zones: us-central1: 16 CPUS (8/8 available) quota too low

I thought it might be a transient error, but it has been consistent. 

Comments

1 comment

  • Comment author
    Samantha (she/her)

    Hi McCracken, Carrie,

    Thanks for writing in. The error you are receiving indicates that you do not have enough quota for the number of CPUs you are requesting in your workflow. 

    Execution failed: allocating: selecting resources: selecting region and zone: no available zones: us-central1: 16 CPUS (8/8 available) quota too low

    I would suggest either resubmitting the workflow with 8 or less CPUs, or submitting a request to increase your CPU quota. More on the latter option can be found here: Google Cloud quotas: What are they and how do you request more?

    Please let me know if you have any questions.

    Best,
    Samantha

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