Joint-genotyping on terra

Post author
rezo mgeladze
Hello I want to split gvcf files into regions (for example, only chromosome 21) and then run joint genotyping across all individuals for that chromosome only. Is there some workflow for that or can you give me some tips how to do that?

Comments

1 comment

  • Comment author
    Anika Das

    Hi Rezo, 

    Thanks for reaching out! We do have a Joint Genotyping featured workflow that might be useful to you. I will also reach out to some others to see if they have any tips or guidance for you! Hope that helps!

    Kind Regards, 

    Anika

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