Nanopre direct mRNA analyses:

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Gulali

• December 07, 2020 03:08

Hello,

Could look into installing the following feature for nanopore direct mRNA sequence analyses.

Thanks

https://github.com/biocorecrg/master_of_pores

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  Samantha Velasquez

  • December 08, 2020 20:49

  Hi Gulali,

   

  Thanks for your post. Unfortunately, the nanopore pipeline you linked is written in Nextflow, which is not something Terra supports. I would suggest you reach out to the authors of the repo and ask if they can make a cloud-ready WDL version of their workflow. Otherwise, you'll need to create the WDL yourself in order to use it in Terra.

   

  Best,

  Samantha

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