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Call input and runtime attributes evaluation failed for ...

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    Giulio Genovese

    It turns out that what is happening is simply that one of the files in the Array[File]+ green_idat_files array is missing. These were files provided to me in the sample.tsv table from another workspace. So I assume that somehow someone deleted some files in the Google bucket but the sample.tsv did not get updated. Why is it though that Terra cannot provide the name of the file that Cromwell is unable to localize in the error message?

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    Jason Cerrato

    Hi Giulio,

    Thanks for the follow-up. We still have a ways to go to make the error messaging more helpful—always a WIP for us! I'm happy to creating a request for the team to put time into improving this error messaging if that's helpful for you. Alternatively, if you're inclined and technically capable, you can feel free to submit a PR for improvements here: https://github.com/broadinstitute/cromwell

    Let me know what works best for you.

    Kind regards,

    Jason

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    Giulio Genovese

    I see, so this is a Cromwell issue rather than a Terra issue. I think I am too swamped right now to take on me another task. Thank you for the explanation though.

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