Please can someone recommend any walk through/ great tutorial on "processing-for-variant-discovery-gatk4" with multiple read groups on terra? I have seen the workflow in terra but I'm not sure I understand what the steps are and the required inputs
I have tumor/Normal samples with aims of doing variant calling. but my starting materials (ubams) are for example;
Again, there are recommendations by GATK but don't know I could implement this in terra
Any suggestions, help and recommendations will be gladly welcome
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