Paired-Fastq-to-Unmapped-Bam stopped with the message "No space left on device".

Hi, @Samantha. I'm new to Terra and need your help for my revise experiments!!

I tried Paired-Fastq-to-Unmapped-Bam with my own files but it stopped. I think it may be because "No space left on device". Part of the Stderr file is shown below. Could you help me??

I am not sure how Terra works, but where do I set the disk space that I can use? When I created a Jupyter Notebook VM in the Tutorial, I set a persistent disk space. However, when I just run Workflow, I can run it without setting the disk space.

- workspace: https://app.terra.bio/#workspaces/KM-202301/Sequence-Format-Conversion%20KM20230121_3
- Submission ID: <cc96492c-43ce-47aa-bcf3-4431cba5d71e>
- workflow ID: eb0279a4-5813-4241-a042-0e6a63677b06
- workflow ID: 0bb3de91-9dd2-4244-83d6-e3f53060b87f
- workflow ID: 1c077068-4951-4ad1-b805-21ed2cb58628
- workflow ID: 8d19c686-a552-4c83-8208-f4663cb27645
- I heve toggled the "Share with support" button to "Yes".

...
INFO    2023-01-24 07:15:34    FastqToSam    Processed 1,050,000,000 records.  Elapsed time: 03:09:30s.  Time for last 1,000,000:    9s.  Last read position: */*
INFO    2023-01-24 07:15:44    FastqToSam    Processed 1,051,000,000 records.  Elapsed time: 03:09:40s.  Time for last 1,000,000:    9s.  Last read position: */*
INFO    2023-01-24 07:15:51    FastqToSam    Processed 525759724 fastq reads
[Tue Jan 24 08:11:34 GMT 2023] picard.sam.FastqToSam done. Elapsed time: 245.54 minutes.
Runtime.totalMemory()=2559049728
To get help, see http://broadinstitute.github.io/picard/index.html#GettingHelp
htsjdk.samtools.util.RuntimeIOException: Write error; BinaryCodec in writemode; streamed file (filename not available)
    at htsjdk.samtools.util.BinaryCodec.writeBytes(BinaryCodec.java:222)
    at htsjdk.samtools.util.BlockCompressedOutputStream.writeGzipBlock(BlockCompressedOutputStream.java:444)
    at htsjdk.samtools.util.BlockCompressedOutputStream.deflateBlock(BlockCompressedOutputStream.java:408)
    at htsjdk.samtools.util.BlockCompressedOutputStream.write(BlockCompressedOutputStream.java:301)
    at htsjdk.samtools.util.BinaryCodec.writeBytes(BinaryCodec.java:220)
    at htsjdk.samtools.util.BinaryCodec.writeBytes(BinaryCodec.java:212)
    at htsjdk.samtools.BAMRecordCodec.encode(BAMRecordCodec.java:168)
    at htsjdk.samtools.BAMFileWriter.writeAlignment(BAMFileWriter.java:144)
    at htsjdk.samtools.SAMFileWriterImpl.close(SAMFileWriterImpl.java:227)
    at htsjdk.samtools.AsyncSAMFileWriter.synchronouslyClose(AsyncSAMFileWriter.java:38)
    at htsjdk.samtools.util.AbstractAsyncWriter.close(AbstractAsyncWriter.java:89)
    at picard.sam.FastqToSam.doWork(FastqToSam.java:367)
    at picard.cmdline.CommandLineProgram.instanceMain(CommandLineProgram.java:309)
    at org.broadinstitute.hellbender.cmdline.PicardCommandLineProgramExecutor.instanceMain(PicardCommandLineProgramExecutor.java:37)
    at org.broadinstitute.hellbender.Main.runCommandLineProgram(Main.java:160)
    at org.broadinstitute.hellbender.Main.mainEntry(Main.java:203)
    at org.broadinstitute.hellbender.Main.main(Main.java:289)
Caused by: java.io.IOException: No space left on device
    at sun.nio.ch.FileDispatcherImpl.write0(Native Method)
    at sun.nio.ch.FileDispatcherImpl.write(FileDispatcherImpl.java:60)
    at sun.nio.ch.IOUtil.writeFromNativeBuffer(IOUtil.java:93)
    at sun.nio.ch.IOUtil.write(IOUtil.java:65)
    at sun.nio.ch.FileChannelImpl.write(FileChannelImpl.java:211)
    at java.nio.channels.Channels.writeFullyImpl(Channels.java:78)
    at java.nio.channels.Channels.writeFully(Channels.java:101)
    at java.nio.channels.Channels.access$000(Channels.java:61)
    at java.nio.channels.Channels$1.write(Channels.java:174)
    at java.io.BufferedOutputStream.flushBuffer(BufferedOutputStream.java:82)
    at java.io.BufferedOutputStream.write(BufferedOutputStream.java:126)
    at htsjdk.samtools.util.BinaryCodec.writeBytes(BinaryCodec.java:220)
    ... 16 more