On April 22-23, 2021, instructors from the Broad Institute and Johns Hopkins University taught a 2-day virtual webinar to the as a part of the 8-week Virtual Applied Data Science Training Institute (VADSTI) data science training series. In this webinar, you will:
- Explore AnVIL data in Terra
- Pull workflows from Dockstore to run in the Cloud
- Run batch analysis with Workflows in Terra
- Interact with data through Jupyter Notebooks
- Use Galaxy with AnVIL data on Terra
- Perform a Genome Assembly in Galaxy
Materials, Agenda, & Recording - Module 7, Day 1
The webinar recording can be found here. All presentation materials are listed below:
|
Presentation |
Presenter |
Links |
|---|---|---|
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AnVIL: A new vision for Analysis in the Cloud |
Jeff Leek |
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Data that's better, bigger, faster in the AnVIL |
Robert Majovski |
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Intro to AnVIL Powered by Terra |
Robert Majovski |
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Get set up in Terra (demo) |
Kate Herman |
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Data and documentation in a workspace |
Robert Majovski |
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Find and import workflows in Dockstore (demo) |
Beth Sheets |
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Set up and run your workflow (demo) |
Kate Herman |
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Interactive analysis (demo) |
Kate Herman |
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Wrap-up / Q&A |
Kate Herman |
Materials, Agenda, & Recording - Module 7, Day 2
The webinar recording can be found here. All presentation materials are listed below:
|
Presentation |
Presenter |
Links |
|---|---|---|
|
Intro to Galaxy & Launching in AnVIL |
Dave Clements |
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|
Introduction to Genome Sequencing & Assembly |
Michael Schatz |
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Message in a Genome Assembly (guided demo), & Shutting Down Galaxy |
Dave Clements |
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Wrap-up / Q&A |
Michael Schatz & Dave Clements |
Further Resources
For more information on Terra, visit https://terra.bio/.
For more information on AnVIL, visit https://anvilproject.org/learn.