[2021 Mar] NHLBI BioData Catalyst Onboarding Webinar Session 1

Derek Caetano-Anolles
  • Updated

On March 16, 2021, instructors from the Broad Institute taught a 4-hour virtual webinar to the NHLBI BioData Catalyst (BDC) group. In this webinar, you will learn how to:

  • Export, organize, and analyze Gen3 hosted data
  • Bring your own data to Terra
  • Access a library of pre-written workflows
  • Run a workflow and access results
  • Make use of APIs and CLI for working with DRS objects in a Terra Jupyter notebook

 


 

Materials

You can find all the materials at broad.io/BDCSpring21. If you would like to follow along with this workshop, please complete the pre-work specified in the syllabus before continuing. 

 


 

Agenda & Video

The webinar recording can be found here. Time stamps below may reference specific workshop materials where relevant.

 

00:00:00 - Intro to Terra (slides)

Instructor: Anton Kovalsky, Science Writer, Data Sciences Platform, Broad Institute

 

00:06:30 - Guided Platform Tour

Instructor: Anton Kovalsky, Science Writer, Data Sciences Platform, Broad Institute

 

00:32:25​ - Adding and Organizing Data in the Cloud (Slides)

Instructor: Anton Kovalsky, Science Writer, Data Sciences Platform, Broad Institute

 

01:09:01 - Data discovery and exploration with Gen3 and Terra (Slides)

Instructor: Allie Hajian, Senior Science Writer, Data Sciences Platform, Broad Institute

 

01:28:54 - Batch Analysis with Workflows (Slides)

Instructor: Allie Hajian, Senior Science Writer, Data Sciences Platform, Broad Institute

 

01:44:28 - Interactive Analysis with Jupyter Notebooks (Slides)

Instructor: Anton Kovalsky, Science Writer, Data Sciences Platform, Broad Institute

 

02:07:19 - Additional Tips with Workflows

Instructor: Allie Hajian, Senior Science Writer, Data Sciences Platform, Broad Institute

 

02:14:57 - Closing Remarks

Instructor: Anton Kovalsky, Science Writer, Data Sciences Platform, Broad Institute

 


 

Further Resources

For more information on Terra, visit https://terra.bio/

For more information on NHLBI BioData Catalyst, visit https://biodatacatalyst.nhlbi.nih.gov/

For the second webinar in this series, see this article 

 

 

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