On March 16, 2021, instructors from the Broad Institute taught a 4-hour virtual webinar to the NHLBI BioData Catalyst (BDC) group. In this webinar, you will learn how to:
- Export, organize, and analyze Gen3 hosted data
- Bring your own data to Terra
- Access a library of pre-written workflows
- Run a workflow and access results
- Make use of APIs and CLI for working with DRS objects in a Terra Jupyter notebook
Materials
You can find all the materials at broad.io/BDCSpring21. If you would like to follow along with this workshop, please complete the pre-work specified in the syllabus before continuing.
Agenda & Video
The webinar recording can be found here. Time stamps below may reference specific workshop materials where relevant.
00:00:00 - Intro to Terra (slides)
Instructor: Anton Kovalsky, Science Writer, Data Sciences Platform, Broad Institute
00:06:30 - Guided Platform Tour
Instructor: Anton Kovalsky, Science Writer, Data Sciences Platform, Broad Institute
00:32:25 - Adding and Organizing Data in the Cloud (Slides)
Instructor: Anton Kovalsky, Science Writer, Data Sciences Platform, Broad Institute
01:09:01 - Data discovery and exploration with Gen3 and Terra (Slides)
Instructor: Allie Hajian, Senior Science Writer, Data Sciences Platform, Broad Institute
01:28:54 - Batch Analysis with Workflows (Slides)
Instructor: Allie Hajian, Senior Science Writer, Data Sciences Platform, Broad Institute
01:44:28 - Interactive Analysis with Jupyter Notebooks (Slides)
Instructor: Anton Kovalsky, Science Writer, Data Sciences Platform, Broad Institute
02:07:19 - Additional Tips with Workflows
Instructor: Allie Hajian, Senior Science Writer, Data Sciences Platform, Broad Institute
02:14:57 - Closing Remarks
Instructor: Anton Kovalsky, Science Writer, Data Sciences Platform, Broad Institute
Further Resources
For more information on Terra, visit https://terra.bio/
For more information on NHLBI BioData Catalyst, visit https://biodatacatalyst.nhlbi.nih.gov/
For the second webinar in this series, see this article